miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|133864188|gb|EL895627.1|EL895627 AAACACACACTATACTACAAAGGATATACATGGCTCTCAGAATGTGGGCTTCTTCCACGGCCAATGCATTCAGATTCTCT
TATGCCTCCAAATCCCATCTCTCCCCTGCGTTCTCTCTCTCCCGCTGCTTCTCTACCGTGTTGGATGGTTTGAAGTATGC
ATCCTCGCATGAGTGGGTGAAGCATGAAGGCGCTGTGGCTACAATCGGCATCACCGACCATGCTCAGGTTTTTCTTCTTC
TCCCCAATATGCTGTATGATATTATTAAAATTTATGTCCCACATTGCTTACGAGAGGAAACTTTTTGGCCTTTATAAAGA
TTAAGAAAGAGCGTTGATGGTAAATTCAGCTAGTCTTTTGGAGAATAAACCTAATAAGTGGTATCAGGGCCAGCTTTCGA
TGCTCAGCCCTTAAGGAACAGGTCTGAGAATTAAAACCTGGCTCTGATACCATTTGTGTTAATTTAGGACTTTGGACTAC
TTTTTTCTTTTTTATTTGCTGATTTTTTGTAGCCAAAAATGATTCTAGTTGTCATGATTATTGGTAAATGATAGAAATAG
GCTAATCATACTCATAAAAGAAAAATAAAAATGGTGCTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGT




Most similar to sp|P16048|GCSH_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P16048|GCSH_PEA Glycine cleavage system H protein, mitochondrial
           OS=Pisum sativum GN=GDCSH PE=1 SV=1
          Length = 165

 Score =  116 bits (290), Expect = 1e-25
 Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 6/78 (7%)
 Frame = +3

Query: 30  MALRMWASSTANAFRFSYASKSHLSPAFSLSRCFSTVLDGLKYASSHEWVKHEGAVATIG 209
           MALRMWASSTANA + S +S+ HLSP FS+SRCFS VLDGLKYA SHEWVKHEG+VATIG
Sbjct: 1   MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIG 60

Query: 210 ITDHAQ------VFLLLP 245
           ITDHAQ      VF+ LP
Sbjct: 61  ITDHAQDHLGEVVFVELP 78